The detailed information of tRNA gene sequence


Sequence ID>WENV170010764
Genome IDAPMI01028093
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 13022
End posion on genome 12942
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
atgtaagtaa
tRNA gene sequence 
GTCGCTGTGTCCGAGTGGTTAAGGAGACAGACTAGAAATCTGTTGGGCTTGCCCGCGCAG
GTTCGAATCCTGCCGGCGACGttt
Downstream region at tRNA end position 
ttttatttta
Secondary structure (Cloverleaf model)
>WENV170010764	Ser	AGA
                   a      Gttt ttttatttta
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTTGCCCGC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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