The detailed information of tRNA gene sequence


Sequence ID>ENV08001919
Genome IDABOK01017442
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 90
End posion on genome 17
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
acggctccgg
tRNA gene sequence 
TGGGGGATAGTTTAACGGTAGAACCGCGGACTCTGACTCCGCTAGTCCTGGTTCGAATCC
AGGTCCCCCAGCCA
Downstream region at tRNA end position 
ctcagatttc
Secondary structure (Cloverleaf model)
>ENV08001919	Gln	CTG
                   g      GCCA ctcagatttc
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G G A C C     A
        A A        A      | | | | |     G
      C     T T T G       C C T G G     C
      G     + | | |                 T T
      G     G A A C
        T A        C     TAGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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