The detailed information of tRNA gene sequence


Sequence ID>WENV170010788
Genome IDAPMI01028975
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 649
End posion on genome 726
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggccgcatcT
tRNA gene sequence 
GGATGTGTAGCTCAGTTGGTTAGAGCGTTCGCTTCACACGCGAGAGGTCAGGGGTTCGAG
TCCCTTCACATCCACCC
Downstream region at tRNA end position 
ttggtgaatc
Secondary structure (Cloverleaf model)
>WENV170010788	Val	CAC
                   T      ACCC ttggtgaatc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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