The detailed information of tRNA gene sequence


Sequence ID>WENV170010794
Genome IDAPMI01029218
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3218
End posion on genome 3129
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcaccggct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGCCGCACTCGAAATGCGGAGTACGTGCAAGCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttatacttt
Secondary structure (Cloverleaf model)
>WENV170010794	Ser	CGA
                   t      GCCA tttatacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACGTGCAAGCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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