The detailed information of tRNA gene sequence


Sequence ID>WENV170010809
Genome IDAPMI01029836
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2234
End posion on genome 2327
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcgacgcgt
tRNA gene sequence 
GGAGGCGTCGCCTAGTCCGGTCTATGGCGCCCGCCTGCTAAGCGGGTTTGGGGGTTATAC
CCCATCGAGGGTTCAAATCCCTCCGCCTCCGCCA
Downstream region at tRNA end position 
cgcgcaaaag
Secondary structure (Cloverleaf model)
>WENV170010809	Ser	GCT
                   t      GCCA cgcgcaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTGGGGGTTATACCCCATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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