The detailed information of tRNA gene sequence


Sequence ID>WENV170010813
Genome IDAPMI01029865
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1465
End posion on genome 1389
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gccgctcccc
tRNA gene sequence 
GCCCGAATAGCTCAGCCGGTTAGAGCACTTGACTGTTAATCAGGGGGTCGTTGGTTCGAG
TCCAACTTCGGGCGCCA
Downstream region at tRNA end position 
aaatttcaag
Secondary structure (Cloverleaf model)
>WENV170010813	Asn	GTT
                   c      GCCA aaatttcaag
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T + G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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