The detailed information of tRNA gene sequence


Sequence ID>WENV170010857
Genome IDAPMI01032010
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1498
End posion on genome 1575
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cccttggcct
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGGTAGCGCACCTGATTTGGGATCAGGGGGTCGCAGGTTCGA
ATCCTGCCACTCCGACCA
Downstream region at tRNA end position 
tgcttttcaa
Secondary structure (Cloverleaf model)
>WENV170010857	Pro	TGG
                   t      ACCA tgcttttcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  T         C G C G       G C A G G     C
  G         | | | |                 T T
  G         G C G C
    G T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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