The detailed information of tRNA gene sequence


Sequence ID>WENV170010864
Genome IDAPMI01032074
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 230
End posion on genome 159
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaggcccttt
tRNA gene sequence 
ACGGGCATAGTTCAATGGTAGAATAGCGGTCTCCAAAACCGTTGATGGGAGTTCGAATCT
CTCTGCCCGTGCag
Downstream region at tRNA end position 
tttcgtgttt
Secondary structure (Cloverleaf model)
>WENV170010864	Trp	CCA
                   t      GCag tttcgtgttt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T C T C     A
        A A        A      | + | | |     G
      T     C T T G       G G G A G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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