The detailed information of tRNA gene sequence


Sequence ID>WENV170010865
Genome IDAPMI01032080
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 29498
End posion on genome 29417
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcagagaa
tRNA gene sequence 
GACACTTTGGCCGAGTGGTTAAGGCGTTAGCCTGCTAAGTTAATTCCGTCAGGAGCGTGG
GTTCAAATCCCACAGGTGTCGCtt
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV170010865	Ser	GCT
                   a      GCtt ttttattttt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TTCCGTCAGGAGC
                    T - A
                    T - A
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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