The detailed information of tRNA gene sequence


Sequence ID>WENV170010886
Genome IDAPMI01033353
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2020
End posion on genome 1934
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tgactccact
tRNA gene sequence 
GCCCAGGTGGCGAAATTGGTAGACGCGCTAGTTTCAGGTACTAGTCCTGTCAAAGGGGTG
AAGGTTCGAGTCCTTTCCTGGGCACCA
Downstream region at tRNA end position 
actctcagat
Secondary structure (Cloverleaf model)
>WENV170010886	Leu	CAG
                   t      ACCA actctcagat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TCCTGTCAAAGGGGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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