The detailed information of tRNA gene sequence


Sequence ID>WENV170010916
Genome IDAPMI01035055
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 699
End posion on genome 626
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttttaact
tRNA gene sequence 
ACGGGCATCGTCCAATGGTAGGATACCGGTCTCCAAAACCGTTGATCAGGGTTCGAATCC
TTGTGCCCGTGCAA
Downstream region at tRNA end position 
ataaaaatta
Secondary structure (Cloverleaf model)
>WENV170010916	Trp	CCA
                   t      GCAA ataaaaatta
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G T T C C     A
        A A        C      | | + | |     G
      T     C C T G       C A G G G     C
      G     | | | +                 T T
      G     G G A T
        T A        A     TGAT
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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