The detailed information of tRNA gene sequence


Sequence ID>WENV170010937
Genome IDAPMI01035406
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 504
End posion on genome 412
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctccctatc
tRNA gene sequence 
GGAGAGGTAGCATAGCCCGGCCTAATGCGCTCGCCTGGAAAGCGGGTACGGTCTAAACCG
CCGTCATGGGTTCGAATCCCATCCTCTCCGCCT
Downstream region at tRNA end position 
gaatgtttgt
Secondary structure (Cloverleaf model)
>WENV170010937	Ser	GGA
                   c      GCCT gaatgtttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C C G A        A      | | | | |     G
  C         T A C G       A T G G G     C
  G         | | | |                 T T
  G         A T G C
    C C T A        G     TACGGTCTAAACCGCCGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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