The detailed information of tRNA gene sequence


Sequence ID>WENV170010982
Genome IDAPMI01037716
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3054
End posion on genome 3141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acggcccctc
tRNA gene sequence 
GGGTCTGTGGCAGAGTGGTTGAATGCACCGGTCTTGAAAACCGGCGTGGGGAAACCCATC
GTGAGTTCGAATCTCACCGGACCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170010982	Ser	TGA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTGGGGAAACCCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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