The detailed information of tRNA gene sequence


Sequence ID>WENV170010985
Genome IDAPMI01038006
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 409
End posion on genome 485
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atgcgggcat
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGAAAGTTCAAA
TCTTTCCGGGCCCACCA
Downstream region at tRNA end position 
ttcttcttgc
Secondary structure (Cloverleaf model)
>WENV170010985	Ile	GAT
                   t      ACCA ttcttcttgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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