The detailed information of tRNA gene sequence


Sequence ID>WENV170011027
Genome IDAPMI01040087
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 545
End posion on genome 470
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gccgcgtctc
tRNA gene sequence 
GGGTCCTTAACTCAGTTGGTAGAGTGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGATT
CTCCTAGGATCCACCA
Downstream region at tRNA end position 
tttcagacgt
Secondary structure (Cloverleaf model)
>WENV170011027	Ala	TGC
                   c      ACCA tttcagacgt
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C A       A G G A G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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