The detailed information of tRNA gene sequence


Sequence ID>WENV170011031
Genome IDAPMI01040319
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2157
End posion on genome 2082
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaggttatca
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGATC
CCGTCCGGCTCCACCA
Downstream region at tRNA end position 
accttcttaa
Secondary structure (Cloverleaf model)
>WENV170011031	Ala	TGC
                   a      ACCA accttcttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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