The detailed information of tRNA gene sequence


Sequence ID>WENV170011037
Genome IDAPMI01040682
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1967
End posion on genome 2041
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acaacgacac
tRNA gene sequence 
GGGCGATTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCACATGTTCGATCC
ATGTATCGCCCACCA
Downstream region at tRNA end position 
attatcaatc
Secondary structure (Cloverleaf model)
>WENV170011037	Val	CAC
                   c      ACCA attatcaatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G T A C     A
        G A        A      | | | | |     G
      C     C T C G       A C A T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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