The detailed information of tRNA gene sequence


Sequence ID>WENV170011044
Genome IDAPMI01041024
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2288
End posion on genome 2372
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aagaccaccg
tRNA gene sequence 
GTCCGGGTGGCGGAATGGCAGACGCGCTAGCTTGAGGTGCTAGTGCCCTTAACGGGCGTG
GGGGTTCAAGTCCCCCTCCGGACACtc
Downstream region at tRNA end position 
ctcatatcgg
Secondary structure (Cloverleaf model)
>WENV170011044	Leu	GAG
                   g      ACtc ctcatatcgg
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G G G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGCCCTTAACGGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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