The detailed information of tRNA gene sequence


Sequence ID>WENV170011081
Genome IDAPMI01042697
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2935
End posion on genome 3011
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttcctctttt
tRNA gene sequence 
CTGGCTATAGCGCAGCCTGGTAGCGCACCTGCTTTGGGAGCAGGTTGTCGCAGGTTCAAA
TCCTGCTAGCCAGACCA
Downstream region at tRNA end position 
ttttcctgcg
Secondary structure (Cloverleaf model)
>WENV170011081	Pro	TGG
                   t      ACCA ttttcctgcg
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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