The detailed information of tRNA gene sequence


Sequence ID>WENV170011102
Genome IDAPMI01043373
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3314
End posion on genome 3243
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aacaaaaact
tRNA gene sequence 
ACTCCGATAGTGTAATGGCAGCATCTCAGTCTCCAAAACTGATGGTATTGGTTCGAATCC
GATTCGGAGTGCag
Downstream region at tRNA end position 
gaatgtaatg
Secondary structure (Cloverleaf model)
>WENV170011102	Trp	CCA
                   t      GCag gaatgtaatg
                     A - T
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T A G C C     A
        A A        A      | | + | |     G
      T     T G T G       A T T G G     C
      G     + | | +                 T T
      G     G C A T
        C A        C     TGGT
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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