The detailed information of tRNA gene sequence


Sequence ID>WENV170011108
Genome IDAPMI01044051
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1595
End posion on genome 1670
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgaagcgct
tRNA gene sequence 
GGGCCCTTAGCTCAATGGTTAGAGCCGTCCGCTCATAACGGATTGGTTGCAGGTTCGAGT
CCTGCAGGGCCCACCA
Downstream region at tRNA end position 
tttctccgtg
Secondary structure (Cloverleaf model)
>WENV170011108	Met	CAT
                   t      ACCA tttctccgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G C A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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