The detailed information of tRNA gene sequence


Sequence ID>WENV170011117
Genome IDAPMI01044232
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 255
End posion on genome 170
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcaccc
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGGTGAAAGCCTCC
GGGGGTTCGAATCCCTCTCTCTCCGCtg
Downstream region at tRNA end position 
atagcactta
Secondary structure (Cloverleaf model)
>WENV170011117	Ser	TGA
                   c      GCtg atagcactta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGTGAAAGCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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