The detailed information of tRNA gene sequence


Sequence ID>WENV170011118
Genome IDAPMI01044342
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1191
End posion on genome 1265
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtatcagaat
tRNA gene sequence 
TACAGGGTAGCTTAACTGGATAAAGCATTGGCCTCATCAACCAAAGAGTGCAGGTTCGAA
TCCTGTCCCTGTAGCtt
Downstream region at tRNA end position 
tttctgcttc
Secondary structure (Cloverleaf model)
>WENV170011118	Met	CAT
                   t      GCtt tttctgcttc
                     T - A
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C A A        A      + | | | |     G
    T       T T C G       G C A G G     C
    G       | | | |                 T T
    G       A A G C
      A T A        A     AGAGT
                    T - A
                    T - A
                    G - C
                    G - C
                    C   A
                  C       A
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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