The detailed information of tRNA gene sequence


Sequence ID>WENV170011149
Genome IDAPMI01046147
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 188
End posion on genome 113
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgtggtcgc
tRNA gene sequence 
GGGCGATTGGCGCAGTTGGTAGCGCGCTTCCTTCACACGGAAGAGGTCATCGGTTCGAGT
CCGGTATCGCCCACCA
Downstream region at tRNA end position 
ctcgtcatga
Secondary structure (Cloverleaf model)
>WENV170011149	Val	CAC
                   c      ACCA ctcgtcatga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G G C C     A
      T G A        G      | + | | |     G
    T       C G C G       A T C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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