The detailed information of tRNA gene sequence


Sequence ID>WENV170011157
Genome IDAPMI01046468
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1390
End posion on genome 1308
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
taacacactt
tRNA gene sequence 
GCCCAGGTGGCGGAATTGGTAGACGCGCTGGTCTCAAACACCAGTTCTTAGGAGTACCGG
TTCGATCCCGGTCCTGGGTACAA
Downstream region at tRNA end position 
aaaacctctg
Secondary structure (Cloverleaf model)
>WENV170011157	Leu	CAA
                   t      ACAA aaaacctctg
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          C T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       A C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTAGGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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