The detailed information of tRNA gene sequence


Sequence ID>WENV170011175
Genome IDAPMI01047599
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 718
End posion on genome 646
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgcctatcac
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGGAGAGCGCTTCAATGGCATTGAAGAGGTCAAGGGTTCGAGT
CCCTTTAGGTCCAtag
Downstream region at tRNA end position 
aagcacactc
Secondary structure (Cloverleaf model)
>WENV170011175	Ala	GGC
                   c      Atag aagcacactc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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