The detailed information of tRNA gene sequence


Sequence ID>WENV170011181
Genome IDAPMI01048201
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4043
End posion on genome 4118
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctctctgtct
tRNA gene sequence 
GGCCCGGTCGTCTAGTGGTTAGGATGCCGCCCTTTCAAGGCGGAGGTCGCGGGTTCAAGT
CCCGTCCGGGCTACCA
Downstream region at tRNA end position 
ctcctttaac
Secondary structure (Cloverleaf model)
>WENV170011181	Glu	TTC
                   t      ACCA ctcctttaac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        C      + | | | |     A
    G       T C T G       G C G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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