The detailed information of tRNA gene sequence


Sequence ID>WENV170011189
Genome IDAPMI01048590
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1873
End posion on genome 1949
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcagagttt
tRNA gene sequence 
GGCTGAGTAGCTCAGCTGGTTAGAGCGCACGACTCATAATCGTGAGGTCGCGGGATCGAG
CCCCGCCTCAGCTACCG
Downstream region at tRNA end position 
gagtcacaca
Secondary structure (Cloverleaf model)
>WENV170011189	Met	CAT
                   t      ACCG gagtcacaca
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          C G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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