The detailed information of tRNA gene sequence


Sequence ID>WENV170011195
Genome IDAPMI01049262
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 133
End posion on genome 43
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctataggcaa
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGTTGAAGGTGCCGCTCTCGAAAAGCGGTGTGCGGTTTTCCCGT
ACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aagaaaatag
Secondary structure (Cloverleaf model)
>WENV170011195	Ser	CGA
                   a      GCCA aagaaaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G C G G G     C
    G         + |                   T T
    T       A G G T
      T G A        G     TGTGCGGTTTTCCCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK