The detailed information of tRNA gene sequence


Sequence ID>WENV170011210
Genome IDAPMI01050075
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3843
End posion on genome 3765
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccacatcgt
tRNA gene sequence 
CGGGCCGTAGCGCAGCCTGGTTTAGCGCGTCCGTCTGGGGGGCGGGAGGTCGTGAGTTCG
AATCTCACCGGCCCGACCA
Downstream region at tRNA end position 
tgtgaaaacg
Secondary structure (Cloverleaf model)
>WENV170011210	Pro	GGG
                   t      ACCA tgtgaaaacg
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     G
  T         C G C G       G T G A G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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