The detailed information of tRNA gene sequence


Sequence ID>WENV170011225
Genome IDAPMI01050887
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1648
End posion on genome 1572
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcacgtatgc
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAC
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
tttctcttca
Secondary structure (Cloverleaf model)
>WENV170011225	Trp	CCA
                   c      GCCA tttctcttca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T C
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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