The detailed information of tRNA gene sequence


Sequence ID>WENV170011234
Genome IDAPMI01051388
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 435
End posion on genome 360
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnccagctgc
tRNA gene sequence 
GCCGAAGTAGCTCAGTCGGTAGAGCAACTGATTCGTAATCAGTAGGTCGGAGGTTCGATT
CCTCTCTTCGGCACCA
Downstream region at tRNA end position 
atttagtttc
Secondary structure (Cloverleaf model)
>WENV170011234	Thr	CGT
                   c      ACCA atttagtttc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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