The detailed information of tRNA gene sequence


Sequence ID>WENV170011237
Genome IDAPMI01051627
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 114
End posion on genome 38
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttaaagcgt
tRNA gene sequence 
GGTGATGTAGCTCAGACGGTTAGAGCGATGGATTCATAACCCATAGGTCGGCAGTTCGAT
TCTGCCCATCACCACCA
Downstream region at tRNA end position 
gcaataccaa
Secondary structure (Cloverleaf model)
>WENV170011237	Met	CAT
                   t      ACCA gcaataccaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     C C G T C     A
      A G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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