The detailed information of tRNA gene sequence


Sequence ID>WENV170011240
Genome IDAPMI01051934
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 7163
End posion on genome 7233
Amino Acid Sup
Anticodon TTA
Upstream region at tRNA start position 
tagataagta
tRNA gene sequence 
ACCTTAGTCGTTCAACGGTAGGACAACGGTCTTTAAATTCGTCAATCTGGGTTCAACTCC
CGGCTAAGGTGtat
Downstream region at tRNA end position 
ttttatgcat
Secondary structure (Cloverleaf model)
>WENV170011240	Sup	TTA
                   a      Gtat ttttatgcat
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     G - C          T C
                    T     G G C C C     A
        A A        C      | + | | |     A
      C     C T T G       C T G G G     C
      G     | + | |                 T T
      G     G G A C
        T A        A     CAAT
                    A - T
                    C - G
                    G - C
                    G + T
                    T   T
                  C       A
                  T       A
                    T T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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