The detailed information of tRNA gene sequence


Sequence ID>WENV170011254
Genome IDAPMI01052432
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 806
End posion on genome 711
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctgcgcggt
tRNA gene sequence 
GGAGGCGTCTGGGTTCCTGGTGGGCCCCCCGGTCTTCAACACCGGTGAGGCCGAGCATCT
CGGTCTGGCAGGTTCGATTCCTGTCCGCCTCCGCCA
Downstream region at tRNA end position 
gcaggtccac
Secondary structure (Cloverleaf model)
>WENV170011254	SeC	TCA
                   t      GCCA gcaggtccac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G T C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C A G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGAGGCCGAGCATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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