The detailed information of tRNA gene sequence


Sequence ID>WENV170011259
Genome IDAPMI01052949
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 989
End posion on genome 914
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtttcgggtg
tRNA gene sequence 
GGGTGCTTAGCTCAGTCGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGCGGTTCGAAC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
ccaccaatgt
Secondary structure (Cloverleaf model)
>WENV170011259	Val	TAC
                   g      ACCA ccaccaatgt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C A
                    T     C T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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