The detailed information of tRNA gene sequence


Sequence ID>WENV170011267
Genome IDAPMI01053330
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1472
End posion on genome 1398
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ataagtatat
tRNA gene sequence 
GCATCTGTAGCACAGCGGTAGTGCGTTTCCTTGACATGGAAGAGGTCACAGGTTCGATCC
CTGTCAGATGCACCA
Downstream region at tRNA end position 
ttttccacta
Secondary structure (Cloverleaf model)
>WENV170011267	Val	GAC
                   t      ACCA ttttccacta
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C A C G       A C A G G     C
      G     | | | |                 T T
      G     G T G C
        T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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