The detailed information of tRNA gene sequence


Sequence ID>WENV170011311
Genome IDAPMI01055091
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1071
End posion on genome 995
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccgtttca
tRNA gene sequence 
GGGCCGTTAGCTCAGTCGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGGGGGTTCAAG
TCCCTCACGGCCCACCA
Downstream region at tRNA end position 
atcgcatcaa
Secondary structure (Cloverleaf model)
>WENV170011311	Met	CAT
                   a      ACCA atcgcatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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