The detailed information of tRNA gene sequence


Sequence ID>WENV170011328
Genome IDAPMI01056329
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3
End posion on genome 75
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GTCCATGTAGCTCAAAGGTAGAGCAGCGGCCTCCTAAGCCGAAGGTTGTGGGTTCGATTC
CCATCATGGATGCtt
Downstream region at tRNA end position 
tttattctta
Secondary structure (Cloverleaf model)
>WENV170011328	Arg	CCT
                   a      GCtt tttattctta
                     G + T
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      A     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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