The detailed information of tRNA gene sequence


Sequence ID>WENV170011335
Genome IDAPMI01057445
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 359
End posion on genome 275
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agcgggaacc
tRNA gene sequence 
GCCGGAGTGGTGGAATTGGTAGACGCGCTGCGTTCAGGGCGCAGTGTCCGCAAGGACGTG
CCGGTTCGAGTCCGGCCTTCGGCACtt
Downstream region at tRNA end position 
ggtaggggag
Secondary structure (Cloverleaf model)
>WENV170011335	Leu	CAG
                   c      ACtt ggtaggggag
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TGTCCGCAAGGACGT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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