The detailed information of tRNA gene sequence


Sequence ID>WENV170011342
Genome IDAPMI01058574
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 116
End posion on genome 201
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tgggtcaccc
tRNA gene sequence 
GCCGGGGTGGTGGAATGGCAGACACGGGGCACTCAAAATGCTCTGACCGCAAGGTCGTGC
GGGTTCAAGTCCCGCTCCCGGCACCG
Downstream region at tRNA end position 
tagtccggca
Secondary structure (Cloverleaf model)
>WENV170011342	Leu	CAA
                   c      ACCG tagtccggca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G C G G G     C
    G         | | |                 T T
    C       A C A C
      A G          G     TGACCGCAAGGTCGT
                    G - C
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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