The detailed information of tRNA gene sequence


Sequence ID>WENV170011349
Genome IDAPMI01059159
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3046
End posion on genome 2976
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnagtcaa
tRNA gene sequence 
GCTGCAATAGTTTAGTGGTAGAATTGAGCGTTGCCATCGCTTAGGCCCGAGTTCGATTCT
CGGTTGCAGCAttt
Downstream region at tRNA end position 
ttgtctcaat
Secondary structure (Cloverleaf model)
>WENV170011349	Gly	GCC
                   a      Attt ttgtctcaat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     A - T
                     A - T          T T
                    T     G G C T C     A
        G A        A      | | | | |     G
      T     T T T G       C C G A G     C
      G     + | | +                 T T
      G     G A A T
        T A        T     AGGC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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