The detailed information of tRNA gene sequence


Sequence ID>WENV170011357
Genome IDAPMI01060031
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3956
End posion on genome 3866
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagcggttc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCATACCCCAAAAGGGT
ATCATGGGTTCGAATCCCATCGTCTCCGCCA
Downstream region at tRNA end position 
ttcttctttc
Secondary structure (Cloverleaf model)
>WENV170011357	Ser	GCT
                   c      GCCA ttcttctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACCCCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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