The detailed information of tRNA gene sequence


Sequence ID>WENV170011367
Genome IDAPMI01061118
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 816
End posion on genome 744
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctcgttgtca
tRNA gene sequence 
GGGCGTATAGCTCAGCTGGGAGAGCGCTACAATCGCACTGTAGAGGTCAGGGGTTCGAAT
CCCCTTACGTCCAagc
Downstream region at tRNA end position 
caagttagtt
Secondary structure (Cloverleaf model)
>WENV170011367	Ala	CGC
                   a      Aagc caagttagtt
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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