The detailed information of tRNA gene sequence


Sequence ID>WENV170011368
Genome IDAPMI01061130
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2297
End posion on genome 2223
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatttgcag
tRNA gene sequence 
TGCGAGGTAGAGCAGCGGTAGCTCGTCGGGCTCATAAGCCGAAGGTCCTGGGTTCGATCC
CCAGCTTCGCAACAA
Downstream region at tRNA end position 
aaaccattcg
Secondary structure (Cloverleaf model)
>WENV170011368	Met	CAT
                   g      ACAA aaaccattcg
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          C T
                    T     G A C C C     A
        G A        A      | | | | |     G
      C     C G A G       C T G G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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