The detailed information of tRNA gene sequence


Sequence ID>WENV170011381
Genome IDAPMI01061933
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 800
End posion on genome 874
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgctctga
tRNA gene sequence 
GGGCGCATAGCTCAACGGCAGAGCTGTCGGCTCATAACTGATAGGTTCTAGGTTCGAATC
CTAGTGCGCCCACAA
Downstream region at tRNA end position 
cctgcgataa
Secondary structure (Cloverleaf model)
>WENV170011381	Met	CAT
                   a      ACAA cctgcgataa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
        A A        A      | | | | |     G
      C     C T C G       C T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        T     AGGTT
                    G + T
                    T - A
                    C - G
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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