The detailed information of tRNA gene sequence


Sequence ID>WENV170011387
Genome IDAPMI01062464
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3854
End posion on genome 3779
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgcaggtgtt
tRNA gene sequence 
GCTCACATAGCTCAGTTGGCAGAGCACATCCTTGGTAAGGATGAGGTCACCGGTTCGATC
CCGGTTGTGAGCTCTA
Downstream region at tRNA end position 
cacaacgccc
Secondary structure (Cloverleaf model)
>WENV170011387	Thr	GGT
                   t      TCTA cacaacgccc
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     A - T          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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