The detailed information of tRNA gene sequence


Sequence ID>WENV170011398
Genome IDAPMI01063035
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1210
End posion on genome 1134
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccgtcgtgt
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGCTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCGAG
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
tttcccccaa
Secondary structure (Cloverleaf model)
>WENV170011398	Met	CAT
                   t      ACCA tttcccccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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