The detailed information of tRNA gene sequence


Sequence ID>WENV170011401
Genome IDAPMI01063416
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 174
End posion on genome 248
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaattc
tRNA gene sequence 
GGGCGGTTAACTCAGGGGTAGAGTGCCACCTTCACACGGTGGAAGTCGCAGGTTCGAACC
CTGCACCGCCCACCA
Downstream region at tRNA end position 
gtacacaaac
Secondary structure (Cloverleaf model)
>WENV170011401	Val	CAC
                   c      ACCA gtacacaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     C G T C C     A
        G A        A      | | | | |     G
      G     C T C A       G C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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