The detailed information of tRNA gene sequence


Sequence ID>WENV170011414
Genome IDAPMI01064100
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 455
End posion on genome 383
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atttcattca
tRNA gene sequence 
GGGCAATTAGCTCAATTGGCAGAGCACTCCTTTGACGTGGGAGGGGTTAGAGGTTCGAGT
CCTCTATTGCCCAtaa
Downstream region at tRNA end position 
gaactcagta
Secondary structure (Cloverleaf model)
>WENV170011414	Val	GAC
                   a      Ataa gaactcagta
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T G
                    T     T C T C C     A
      T A A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    T - A
                    C - G
                    C - G
                    T + G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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